The article provides a comparative evaluation of the treatment of patients with confirmed ischemic stroke (n = 151) in the basin middle cerebral artery (MCA) frequency-modulated magnetic-(FM MLT) and conventional medical treatment (n = 121) with respect to only medical therapy (n = 30). The developed technique provides FM MLT transcranial effect on ischemic heart projection bifurcation carotid artery on the side of the hearth, on the eyeball through the closed eyelid on the side chamber and collar zone (the projection of C8-Th3 segments). The induction of MT - up to 30 mT, the laser power - up to 50 mW, frequency modulation - 10 and 37.5 Hz. On the basis of the results obtained directly in the main group 84 (69.4%) patients completed the study with a minimum and a slight neurological deficit in the control group, the figure was 33.3%. At follow-up in terms of continuing rehabilitation achievements are preserved throughout the year (dates catamnesis).